TopIllust
Annual Report 2003    
  Research Overview and Topics in 2002
   Natural Resources Inventory Center   
       

The mission of the Natural Resources Inventory Center is 1) to perform fundamental research on the classification, identification, characteristics, and functions of agro-environmental resources such as soils, insects, and microorganisms; 2) to promote and support research in these areas through collection, preservation, exhibition, lending, and donation of specimens and samples; 3) to store all agricultural environment information collected in databases and to develop inventory systems that can be accessed with the aid of tools such as the Internet; and 4) to collect and evaluate microbial and insect genetic resources as a sub-bank under the MAFF Genebank Project, in collaboration with related research groups.

The Natural Resources Inventory Center has 3 laboratories: Soil Classification, Insect Systematics and Microbial Systematics. Each laboratory has Soil Museum, Insect Museum, and Microbial Museum respectively. In accordance with the NIAES mid-term research plan formulated in FY 2001, these laboratories have carried out the following research: 1) classification and elucidation of the functions of soils, and construction of a framework for a soil inventory; 2) construction of a database for type specimens of insects, and construction of a framework for an insect inventory; 3) classification and identification of microorganisms co-inhabiting gramineous plants, analysis of their functions, and construction of a framework for a microorganism inventory; and 4) collection and evaluation of microorganism and insect genetic resources. Major topics in 2002-03 are described in the Topics that follow.

Dr. S. Yoshida, researcher in Microbial Systematics, received an award from the Phytopathological Society of Japan for his contributions on mulberry anthracnose.

Topic 1: New evidence of damage by 3 noctuid (Insecta: Lepidoptera) pests in mainland Japan

The provision of a service for the identification of insects for scientific study, pest management, and human health is one of the important tasks of the Insect Systematics Laboratory. There are many requests for identification every year from agencies and companies in Japan.

Mainly as a result of insect identification requests from the agricultural experimental stations and plant protection offices of several Japanese prefectures, we recently discovered new evidence of damage caused by 3 noctuid pests: Spodoptera cilium, Trichoplusia ni, and Diomea cremata.

Spodoptera cilium (Photo 1A) is distributed in the tropical and subtropical regions from Africa to Asia and the Pacific islands. In Japan this species was previously known to be distributed only in the Ryukyu Islands and the Ogasawara Islands. Although a few adults were collected from Kumamoto and Hyogo Prefectures in 1994, no damage of plants by this species had been reported in Japan. However, since 1999 we have found severe damage by this species to the turf grasses of golf links in Shizuoka Prefecture.

Trichoplusia ni (Photo 1B) is a worldwide notorious pest and causes damage to many vegetables and crops. This species was known to be distributed in Japan but had not previously been recorded as a pest here. In Hyogo Prefecture we recently observed pest populations of this species and damage to many vegetables, including crucifers.

Diomea cremata (Photo 1C) had not previously been recorded as a pest of cultivated mushrooms, but we have observed that this species feeds on the shiitake mushroom, Lentinula edodes, cultivated on synthetic logs (composed mainly of sawdust), which have replaced natural logs over the last decade. The larvae usually consume the thick brown mycelial coat formed on the surfaces of synthetic logs and sometimes eat the fresh fruit bodies.

We plan to construct an insect inventory in which we will accumulate information on insects associated with the agro-environment. Our pest identification services not only give practical help to farmers but will also contribute to the development of this inventory. (S. Yoshimatsu and K. Yasuda)

Topic 2: Index of parasitic and symbiotic microbes on wild plants in Japan and its exhibition on the Web

If we are to maintain global biodiversity, it is important that we construct inventories of the microbes inhabiting our agro-environmental ecosystems. The purpose of this study is to make the first comprehensive index of parasitic, symbiotic, and other microorganisms on wild herbaceous plants in Japan.

Although since about 1910 there have been records of the microorganisms occurring on wild herbaceous plants in Japan, they have never been fully listed because of the low economic importance of wild plants. Accordingly, we collected literature, including our own data, on their occurrence and in 2002 published it as the Bibliography of Parasitic and Symbiotic Microbes on Wild Plants in Japan. This NIAES miscellaneous publication recorded 1302 species of 312 genera of bacteria and fungi on 1626 species of 95 families of wild herbaceous plants, and included scientific names, synonyms, and many other details of each microorganism. Rusts, powdery mildews, smuts, and endophytic fungi are just a few examples.

The database was exhibited on the website of NIAES (http://www.naro.affrc.go.jp/archive/niaes/inventory/microorg/mokuroku/mokuroku.html) as a biodiversity database with open interfaces. Users can retrieve information on microorganisms inhabiting wild plants in Japan in the following ways: 1) retrieval from lists of scientific names of microorganisms or wild herbaceous plants; or 2) retrieval by keywords of scientific names or Japanese names of microorganisms or wild herbaceous plants. After retrieval, the user can display scientific names, synonyms, Japanese names, and literature on the targeted microbes. An English version of the index is also available ( http://www.naro.affrc.go.jp/archive/niaes/inventory/microorg/eng/mokuroku-e.html).

To give the user a better understanding of the microorganisms retrieved, the Encyclopedia of Japanese Fungi on Plants (Fig. 1) was simultaneously made available on the website (http://www.naro.affrc.go.jp/archive/niaes/inventory/microorg/mokuroku/zukan.html). It contains classifications, scientific names with synonyms, Japanese distribution, and color pictures of anamorphs and teleomorphs of 66 fungal species, together with data from the NIAES Herbarium collection dating back to the 1890s. The information is linked to the results mentioned above.

Our database is restricted to only those microorganisms occurring on wild plants in Japan, but it is useful for increasing the worldwide collection of biodiversity data held freely on the Web and universally available. In the long-term we hope to create a vast database of microorganism species and link it to molecular, ecological, and ecosystem level databases. (T. Tsukiboshi)


go to TOP go to TOP
Back To Contents back to Contents
Go To Niaes Home Page back to NIAES Home Page