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2013年3月22日更新

自然変異(NVR) 研究成果の公表

研究成果(平成24年度)

課題番号 発表区分 著者名:
タイトル
雑誌名・URL 巻(号): ページ (発表年)
NVR0001 原著論文 K. Hori, T. Kataoka, K. Miura, M. Yamaguchi, N. Saka, T. Nakahara, Y. Sunohara, K. Ebana, M. Yano:
Variation in heading date conceals quantitative trait loci for other traits of importance in breeding selection of rice.
Breed Sci 62(3):223-234(2012)
NVR0001 原著論文 K. Matsubara, E. Ogiso-Tanaka, K. Hori, K. Ebana, T. Ando, M. Yano:
Natural variation in Hd17, a homolog of Arabidopsis ELF3 that is involved in rice photoperiodic flowering.
Plant Cell Physiol 53(4):709-716(2012)
NVR0001 原著論文 F. Matsuda, Y. Okazaki, A. Oikawa, M. Kusano, R. Nakabayashi, J. Kikuchi, J. Yonemaru, K. Ebana, M. Yano, K. Saito:
Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis.
Plant J 70(4):624-636(2012)
NVR0001 原著論文 T. Tanabata, T. Shibaya, K. Hori, K. Ebana, M. Yano:
SmartGrain: High-Throughput Phenotyping Software for Measuring Seed Shape through Image Analysis.
Plant Physiol 160(4):1871-1880(2012)
NVR0001 原著論文 S. Marzougui, K. Sugimoto, U. Yamanouchi, M. Shimono, T. Hoshino, K. Hori, M. Kobayashi, K. Ishiyama, M. Yano:
Mapping and characterization of seed dormancy QTLs using chromosome segment substitution lines in rice.
Theor Appl Genet 124(5):893-902(2012)
NVR0001 新聞、テレビなどの広報 平林秀介:
野生イネの染色体断片を導入した系統群の開発.
化学工業日報 (2012)
NVR0002 原著論文 K. Hori, T. Kataoka, K. Miura, M. Yamaguchi, N. Saka, T. Nakahara, Y. Sunohara, K. Ebana, M. Yano:
Variation in heading date conceals quantitative trait loci for other traits of importance in breeding selection of rice.
Breed Sci 62(3):223-234(2012)
NVR0002 原著論文 F. Matsuda, Y. Okazaki, A. Oikawa, M. Kusano, R. Nakabayashi, J. Kikuchi, J. Yonemaru, K. Ebana, M. Yano, K. Saito:
Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis.
Plant J 70(4):624-636(2012)
NVR0002 受賞 山崎将紀:
穀物における選抜遺伝子および農業形質関連遺伝子の解析手法の開発.
日本育種学会奨励賞 (2012)
NVR0003 原著論文 K. Hori, T. Kataoka, K. Miura, M. Yamaguchi, N. Saka, T. Nakahara, Y. Sunohara, K. Ebana, M. Yano:
Variation in heading date conceals quantitative trait loci for other traits of importance in breeding selection of rice.
Breed Sci 62(3):223-234(2012)
NVR0004 原著論文 T. Kudo, N. Makita, M. Kojima, H. Tokunaga, H. Sakakibara:
Cytokinin activity of cis-zeatin and phenotypic alterations induced by overexpression of putative cis-Zeatin-O-glucosyltransferase in rice.
Plant Physiol 160(1):319-331(2012)
NVR0004 その他の出版物 M. Kojima, H. Sakakibara:
Highly Sensitive High-Throughput Profiling of Six Phytohormones Using MS-Probe Modification and Liquid Chromatography-Tandem Mass Spectrometry.
Methods Mol Biol 918:151-164(2012)
NVR0005 原著論文 F. Matsuda, Y. Okazaki, A. Oikawa, M. Kusano, R. Nakabayashi, J. Kikuchi, J. Yonemaru, K. Ebana, M. Yano, K. Saito:
Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis.
Plant J 70(4):624-636(2012)
NVR0007 原著論文 Ujiie KIshimaru K:
Identification of chromosome regions affecting leaf area with rice chromosome segment substitution lines.
Plant Production Science 16(1):31-36(2013)
NVR0007 原著論文 Ujiie K, Kashiwagi T, Ishimaru K:
Identification and functional analysis of alleles for productivity in two sets of chromosome segment substitution lines of rice.
Euphytica 187(3):325-337(2012)


研究成果(平成23年度)

課題番号 発表区分 著者名:
タイトル
雑誌名・URL 巻(号): ページ (発表年)
NVR0001 原著論文 Ebitani T, Hayashi N, Omoteno M, Ozaki H, Yano M, Morikawa M, Fukuta Y:
Characterization of Pi13, a blast resistance gene that maps to chromosome 6 in indica rice (Oryza sativa L. variety, Kasalath).
Breed. Sci. 61(3):251-259 (2011)
NVR0001 原著論文 Taguchi-Shiobara F, Kojima Y, Ebitani T, Yano M, Ebana K:
Variation in domesticated rice inflorescence architecture revealed by principal component analysis and quantitative trait locus analysis.
Breed. Sci. 61(1):52-60 (2011)
NVR0001 原著論文 Abe T, Taguchi-Shiobara F, Kojima Y, Ebitani T, Kuramata M, Yamamoto T, Yano M, Ishikawa S:
Detection of a QTL for accumulating Cd in rice that enables efficient Cd phytoextraction from soil.
Breed. Sci. 61(1):43-51 (2011)
NVR0001 原著論文 Y. Uga, K. Okuno, M. Yano:
Dro1, a major QTL involved in deep rooting of rice under upland field conditions.
J Exp Bot 62(8):2485-2494 (2011)
NVR0001 原著論文 K. Matsubara, K. Ebana, T. Mizubayashi, S. Itoh, T. Ando, Y. Nonoue, N. Ono, T. Shibaya, E. Ogiso, K. Hori, S. Fukuoka, M. Yano:
Relationship between transmission ratio distortion and genetic divergence in intraspecific rice crosses.
Mol Genet Genomics 286(5-6):307-139 (2011)
NVR0001 原著論文 K. Matsubara, U. Yamanouchi, Y. Nonoue, K. Sugimoto, Z. X. Wang, Y. Minobe, M. Yano:
Ehd3, encoding a plant homeodomain finger-containing protein, is a critical promoter of rice flowering.
Plant J 66(4):603-612 (2011)
NVR0001 原著論文 Adachi S, Nito N, Kondo M, Yamamoto T, Arai-Sanoh Y, Ando T, Ookawa T, Yano M, Hirasawa T:
Identification of Chromosomal Regions Controlling the Leaf Photosynthetic Rate in Rice by Using a Progeny from Japonica and High-yielding Indica Varieties.
Plant Prod Sci 14(2):118-127 (2011)
NVR0001 原著論文 I. Kasajima, K. Ebana, T. Yamamoto, K. Takahara, M. Yano, M. Kawai-Yamada, H. Uchimiya:
Molecular distinction in genetic regulation of nonphotochemical quenching in rice.
Proc Natl Acad Sci U S A 108(33):13835-13840 (2011)
NVR0001 原著論文 T. Shibaya, Y. Nonoue, N. Ono, U. Yamanouchi, K. Hori, M. Yano:
Genetic interactions involved in the inhibition of heading by heading date QTL, Hd2 in rice under long-day conditions.
Theor Appl Genet 123(7):1133-1143 (2011)
NVR0001 原著論文 K. Ebana, T. Shibaya, J. Wu, K. Matsubara, H. Kanamori, H. Yamane, U. Yamanouchi, T. Mizubayashi, I. Kono, A. Shomura, S. Ito, T. Ando, K. Hori, T. Matsumoto, M. Yano:
Uncovering of major genetic factors generating naturally occurring variation in heading date among Asian rice cultivars.
Theor Appl Genet 122(6):1199-1210 (2011)
NVR0002 原著論文 Taguchi-Shiobara F, Kojima Y, Ebitani T, Yano M, Ebana K:
Variation in domesticated rice inflorescence architecture revealed by principal component analysis and quantitative trait locus analysis.
Breed. Sci. 61(1):52-60 (2011)
NVR0002 原著論文 K. Asano, M. Yamasaki, S. Takuno, K. Miura, S. Katagiri, T. Ito, K. Doi, J. Wu, K. Ebana, T. Matsumoto, H. Innan, H. Kitano, M. Ashikari, M. Matsuoka:
Artificial selection for a green revolution gene during japonica rice domestication.
Proc Natl Acad Sci U S A 108(27):11034-11039 (2011)
NVR0004 総説 T. Kiba, T. Kudo, M. Kojima, H. Sakakibara:
Hormonal control of nitrogen acquisition: roles of auxin, abscisic acid, and cytokinin.
J Exp Bot 62(4):1399-1409 (2011)
NVR0005 原著論文 2012, 03定期報告:
Dissection of genotype-phenotype associations in rice grains using metabolome quantitative trait loci analysis.
Plant J :in press (2012)
NVR0005 原著論文 Yozo Okazaki, Yukiko Kamide, Masami Yokota Hirai, Kazuki Saito:
Plant lipidomics based on hydrophilic interaction chromatography coupled to ion trap time-of-flight mass spectrometry.
Metabolomics (2011)
NVR0005 その他の出版物 Yozo Okazaki, Akira Oikawa, Miyako Kusano, Fumio Matsuda, Kazuki Saito:
Metabolomics in Plant Biotechnology.
Plant Metabolism and Biotechnology :373-389 (2011)
NVR0006 原著論文 楠岡真理子, 七夕高也, 古谷雅理, 斎藤隆文:
時空間投影画像を用いた植物生長量の抽出.
画像電子学会誌 40(5):808-814 (2011)


研究成果(平成22年度)

課題番号 発表区分 著者名:
タイトル
雑誌名・URL 巻(号): ページ (発表年)
NVR0001 原著論文 K. Hori, K. Sugimoto, Y. Nonoue, N. Ono, K. Matsubara, U. Yamanouchi, A. Abe, Y. Takeuchi, M. Yano:
Detection of quantitative trait loci controlling pre-harvest sprouting resistance by using backcrossed populations of japonica rice cultivars
Theor Appl Genet 120(8):1547-1557 (2010)
NVR0001 原著論文 Hirabayashi H, Sato H, Nonoue Y, Takemoto Y, Takeuchi Y, Kato H, Nemoto H, Ogawa T, Yano M, Imbe T, Ando I:
Development of introgression lines derived from Oryza rufipogon and O. glumaepatula in the genetic background of japonica cultivated rice (O. sativa L.) and evaluation of resistance to rice blast
Breed. Sci. 60(5):604-612 (2010)
NVR0001 総説 Fukuoka S, Ebana K, Yamamoto T, Yano M:
Integration of Genomics into Rice Breeding
Rice 3(2-3):131-137 (2010)
NVR0001 総説 Fukuoka S, Nonoue Y, Yano M:
Germplasm enhancement by developing advanced plant materials from diverse rice accessions.
Breed. Sci. 60(5):509-517 (2010)
NVR0001 総説 Yano M, Ebana K, Yamamoto T:
Genomics-assisted breeding in rice.
Gamma Field Symposia 47 :1-9 (2010)
NVR0002 原著論文 Taguchi-Shiobara F, Kojima Y, Ebitani T, Yano M, Ebana K:
Variation in domesticated rice inflorescence architecture revealed by principal component analysis and quantitative trait locus analysis.
Breed. Sci. 61(1):52-60 (2011)
NVR0002 原著論文 Iwata H, Ebana K, Uga Y, Hayashi T, Jannink J-L:
Genome-wide association study of grain shape variation among Oryza sativa L. germplasms based on elliptic Fourier analysis
Molecular Breeding 25(2):203-215 (2010)
NVR0002 原著論文 Nagasaki H, Ebana K, Shibaya T, Yonemaru J, Yano M:
Core single-nucleotide polymorphisms—a tool for genetic analysis of the Japanese rice population
Breed. Sci. 60(5):648-655 (2010)
NVR0002 原著論文 Ebana K, Yonemaru JI, Fukuoka S, Iwata H, Kanamori H, Namiki N, Nagasaki H, Yano M:
Genetic structure revealed by a whole-genome single-nucleotide polymorphism survey of diverse accessions of cultivated Asian rice (Oryza sativa L.)
Breed. Sci. 60(4):390-397 (2010)
NVR0002 原著論文 T. Yamamoto, H. Nagasaki, J. Yonemaru, K. Ebana, M. Nakajima, T. Shibaya, M. Yano:
Fine definition of the pedigree haplotypes of closely related rice cultivars by means of genome-wide discovery of single-nucleotide polymorphisms
BMC Genomics 11:267 (2010)
NVR0002 総説 山本敏央, 矢野昌裕:
コシヒカリゲノムの解読とその育種的利用
テクノイノベーション 20(2):13-19 (2010)
NVR0002 受賞 山本敏央, 米丸淳一, 江花薫子, 矢野昌裕:
SNPアレイを用いて推定した日本の超多収イネ品種群のゲノム構成
優秀発表賞 (2010)
NVR0002 Webサイト 米丸淳一 山本敏央, 長崎英樹, 江花薫子, 中嶋舞子, 柴谷多恵子, 矢野昌裕:
コシヒカリ塩基配列データベース
http://koshigenome.dna.affrc.go.jp (2010)
NVR0002 新聞、テレビなどの広報 コシヒカリの来し方行く末
日経サイエンス8月号(2010)
NVR0002 新聞、テレビなどの広報 コシヒカリ全ゲノム塩基配列解読
コシヒカリ全ゲノム塩基配列解読(2010)
NVR0002 新聞、テレビなどの広報 ゲノム研究広がる対象−イネ・ノリ・昆虫
日経産業新聞(2010)
NVR0002 新聞、テレビなどの広報 コシヒカリゲノム解読−農生研 おいしさの秘密解明へ
日本経済新聞(2010)
NVR0002 新聞、テレビなどの広報 コシ遺伝情報地図を解読
日本農業新聞(2010)
NVR0002 新聞、テレビなどの広報 「コシヒカリ」ゲノムの全塩基配列を解読
農業共済新聞(2010)
NVR0002 新聞、テレビなどの広報 コシヒカリの全ゲノム解読
朝日新聞(2010)
NVR0002 新聞、テレビなどの広報 コシヒカリのゲノムを解読−農生研、半年で
日経産業新聞(2010)
NVR0002 新聞、テレビなどの広報 「コシヒカリ」全ゲノム解読に成功−生物研 遺伝子レベルでゲノム起源も解明 良食味品種の情報基盤に
化学工業日報(2010)
NVR0002 新聞、テレビなどの広報 コシヒカリ遺伝情報の解読に成功
NHK茨城県域デジタル1 NHK総合(首都圏ニュース)(2010)
NVR0002 新聞、テレビなどの広報 コシヒカリのゲノム解読−全体の80%優良品種開発効率化へ
読売新聞(2010)
NVR0002 新聞、テレビなどの広報 日本の超多収イネ 品種群のゲノム構成−農生研グループ明らかに−
科学新聞(2010)
NVR0002 新聞、テレビなどの広報 飼料稲日本由来でも多収 生物資源研 品種育成に弾み
日本農業新聞(2010)
NVR0004 総説 T. Kiba, H. Sakakibara:
Role of cytokinin in the regulation of plant development
Plant Developmental Biology: Biotechnological Perspectives 3 :237-254 (2010)
NVR0004 総説 T. Kudo, T. Kiba, H. Sakakibara:
Metabolism and long-distance translocation of cytokinins
J Integr Plant Biol 52(1):53-60 (2010)
NVR0004 受賞 榊原均:
サイトカイニン生合成経路解明とその育種的利用
第18回木原記念財団特別賞 (2010)
NVR0004 受賞 榊原均:
サイトカイニンの生合成機構の解明と着粒数制御に関する新規機能の発見
第6回日本学術振興会賞 (2010)
NVR0006 原著論文 Tanabata T, Taguchi-Shiobara F, Kishimoto N, Chechetka S, Shinomura T, Habu Y:
A phenomics approach detected differential epigenetic growth regulation between inbreds and their hybrid in Oryza sativa
Mol Breed 26(4):729-734 (2010)


研究成果(平成21年度)

課題番号 発表区分 著者名:
タイトル
雑誌名・学会名・URL 巻(号): ページ (発表年)
NVR0001 原著論文 S. Ishikawa, T. Abe, M. Kuramata, M. Yamaguchi, T. Ando, T. Yamamoto, M. Yano:
A major quantitative trait locus for increasing cadmium-specific concentration in rice grain is located on the short arm of chromosome 7.
J Exp Bot 61(3): 923-934 (2010)
NVR0001 原著論文 Hori K, Yamamoto T, Ebana K, Takeuchi Y, Yano M:
A novel quantitative trait locus, qCL1, involved in semi-dwarfism derived from Japanese rice cultivar Nipponbare.
Breed. Sci. 59(3): 285-295 (2009)
NVR0001 原著論文 T. Takai, A. Ohsumi, Y. San-oh, M. R. Laza, M. Kondo, T. Yamamoto, M. Yano:
Detection of a quantitative trait locus controlling carbon isotope discrimination and its contribution to stomatal conductance in japonica rice.
Theor Appl Genet 118(7): 1401-1410 (2009)
NVR0001 総説 M. Yano, R. Tuberosa:
Genome studies and molecular genetics-from sequence to crops: genomics comes of age.
Curr Opin Plant Biol 12(2): 103-106 (2009)
NVR0001 総説 T. Yamamoto, J. Yonemaru, M. Yano:
Towards the understanding of complex traits in rice: substantially or superficially?
DNA Res 16(3): 141-154 (2009)
NVR0001 その他の出版物 矢野昌裕, 福岡修一, 江花薫子, 山本敏央:
ゲノミクスを背景とした新たな作物育種.
ブレインテクノニュース (133): 40185 (2009)
NVR0002 原著論文 Iwata H, Ebana K, Uga Y, Hayashi T, Jannink J-L:
Genome-wide association study of grain shape variation among Oryza sativa L. germplasms based on elliptic Fourier analysis.
Molecular Breeding 25(2): 203-215 (2010)
NVR0002 原著論文 K. Mochida, T. Furuta, K. Ebana, K. Shinozaki, J. Kikuchi:
Correlation exploration of metabolic and genomic diversity in rice.
BMC Genomics 10: 568 (2009)
NVR0002 受賞 浅野賢治, 山崎将紀, 三浦孝太郎, 呉健忠, 江花薫子, 松本隆, 北野英己, 松岡信, 芦苅基行:
イネジャポニカ栽培化過程におけるSemidwarf1の人為選抜の検証.
第115回講演会日本育種学会優秀発表賞: (2009)
NVR0002 受賞 江花薫子:
Development of mini core collection of Japanese rice landrace.
日本育種学会論文賞: (2009)
NVR0004 原著論文 M. Kojima, T. Kamada-Nobusada, H. Komatsu, K. Takei, T. Kuroha, M. Mizutani, M. Ashikari, M. Ueguchi-Tanaka, M. Matsuoka, K. Suzuki, H. Sakakibara:
Highly sensitive and high-throughput analysis of plant hormones using MS-probe modification and liquid chromatography-tandem mass spectrometry: an application for hormone profiling in Oryza sativa.
Plant Cell Physiol 50(7): 1201-1214 (2009)
NVR0004 総説 T. Kamada-Nobusada, H. Sakakibara:
Molecular basis for cytokinin biosynthesis.
Phytochemistry 70(4): 444-449 (2009)
NVR0004 受賞 榊原均:
Biochemistry and Molecular Biology of Phytohormone Cytokinin.
Olchemim Award: (2009)
NVR0005 原著論文 Fumio Matsuda, Henning Redestig, Yuji Sawada, Yoko Shinbo, Masami Yokota Hirai, Shigehiko Kanaya, Kazuki Saito.:
Visualization of metabolite identifier information.
Plant Biotech 26(5): 479 (2009)
NVR0005 原著論文 F. Matsuda, Y. Shinbo, A. Oikawa, M. Y. Hirai, O. Fiehn, S. Kanaya, K. Saito:
Assessment of metabolome annotation quality: a method for evaluating the false discovery rate of elemental composition searches.
PLoS One 4(10): e7490 (2009)
NVR0006 原著論文 H. Shimizu, T. Tanabata, X. Xie, N. Inagaki, M. Takano, T. Shinomura, K. T. Yamamoto:
Phytochrome-mediated growth inhibition of seminal roots in rice seedlings.
Physiol Plant 137(3): 289-297 (2009)
NVR0006 原著論文 M. Iwamoto, K. Higo, M. Takano:
Circadian clock- and phytochrome-regulated Dof-like gene, Rdd1, is associated with grain size in rice.
Plant Cell Environ 32(5): 592-603 (2009)
NVR0007 原著論文 T. Kashiwagi, K. Shindoh, N. Hirotsu, K. Ishimaru:
Evidence for separate translocation pathways in determining cadmium accumulation in grain and aerial plant parts in rice.
BMC Plant Biol 9: 8 (2009)


研究成果(平成20年度)

課題番号 発表区分 著者名:
タイトル
雑誌名・学会名・URL 巻(号): ページ (発表年)
NVR0001 原著論文 T. Ando, T. Yamamoto, T. Shimizu, X. F. Ma, A. Shomura, Y. Takeuchi, S. Y. Lin, M. Yano
Genetic dissection and pyramiding of quantitative traits for panicle architecture by using chromosomal segment substitution lines in rice
Theor Appl Genet 116(6): 881-890 (2008)
NVR0001 原著論文 T. Kanbe, H. Sasaki, N. Aoki, T. Yamagishi, T. Ebitani, M. Yano, R. Ohsugi
Identification of QTLs for Improvement of Plant Type in Rice (Oryza sativa L.) Using Koshihikari/Kasalath Chromosome Segment Substitution Lines and Backcross Progeny F-2 Population
Plant Prod Sci 11(4): 447-456 (2008)
NVR0001 原著論文 T. Kawakatsu, M. P. Yamamoto, S. Hirose, M. Yano, F. Takaiwa
Characterization of a new rice glutelin gene GluD-1 expressed in the starchy endosperm
J Exp Bot 59(15): 4233-4245 (2008)
NVR0001 原著論文 K. Matsubara, I. Kono, K. Hori, Y. Nonoue, N. Ono, A. Shomura, T. Mizubayashi, S. Yamamoto, U. Yamanouchi, K. Shirasawa, T. Nishio, M. Yano
Novel QTLs for photoperiodic flowering revealed by using reciprocal backcross inbred lines from crosses between japonica rice cultivars
Theor Appl Genet 117(6): 935-945 (2008)
NVR0001 原著論文 Takeuchi Y, Hori K, Suzuki K, Nonoue Y, Takemoto-Kuno Y, Maeda H, Sato H, Hirabayashi H, Ohta H, Ishii T, Kato H, Nemoto H, Imbe T, Ohtsubo K, Yano M, Ando I
Major QTLs for eating quality of an elite Japanese rice cultivar, Koshihikari, on the short arm of chromosome 3.
Breed. Sci. 58(4): 437-445 (2008)
NVR0001 原著論文 蛯谷武志, 山本良孝, 矢野昌裕, 舟根政治
染色体断片置換系統群を利用したイネの玄米外観品質に関与するQTLの検出
育種学研究 10(3): 91-99 (2008)
NVR0002 原著論文 Iwata H, K.Ebana, S.Fukuoka, J-L. Jannink, T.Hayashi
Bayesian multilocus association mapping on ordinal and censored traits and its application to the analysis of genetic variation among Oryza sativa L. germplasms
Theor Appl Genet 118(5): 865-880 (2009)
NVR0002 原著論文 Ebana K, Kojima Y, Fukuoka S, Nagamine T, Kawase M
Development of mini core collection of Japanese rice landrace.
Breed. Sci. 58(3): 281-291 (2008)
NVR0005 原著論文 F. Matsuda, K. Yonekura-Sakakibara, R. Niida, T. Kuromori, K. Shinozaki, K. Saito
MS/MS spectral tag-based annotation of non-targeted profile of plant secondary metabolites
Plant J 57(3): 555-577 (2009)
NVR0005 総説 Oikawa A, Matsuda F, Kusano M, Okazaki Y, Saito K
Rice Metabolomics
Rice 1(1): 63-71 (2008)
NVR0006 原著論文 七夕高也, 清水久代, 篠村知子, 高野誠, 宮村(中村)浩子, 斎藤隆文
イネ初期生育期における表現型解析のための画像計測システム
電気学会論文誌C(電子・情報・システム部門誌) 128(6): 962-969 (2008)
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