Agrogenomics Research Center

Animal Genome Research Unit


2013-2015   2012   2009-2011

  1. Eguchi-Ogawa T, Toki D, Wertz N, Butler J.E, Uenishi H (2012) Structure of the genomic sequence comprising the immunoglobulin heavy constant (IGHC) genes from Sus scrofa Molecular Immunology 52(3-4):97-107
  2. Gotoh H, Aoyama H (2012) Spermatogenic defects in F2 mice between normal mouse strains C3H and C57BL/6 without mutation Congenital Anomalies 52(4):186-190
  3. Gotoh H, Hirawatari K, Hanzawa N, Miura I, Wakana S (2012) QTL on mouse chromosomes 1 and 4 causing sperm-head morphological abnormality and male subfertility Mammalian Genome23(7-8):399-403
  4. Groenen M.A.M, Archibald A.L, Uenishi H, Tuggle C.K, Takeuchi Y, Rothschild M.F, Rogel-Gaillard C, Park C, Milan D, Megens H-J, Li S, Larkin D.M, Kim H, Frantz L.A.F, Caccamo M, Ahn H, Aken B.L, Anselmo A, Anthon C, Auvil L, Badaoui B, Beattie C.W, Bendixen C, Berman D, Blecha F, Blomberg J, Bolund L, Bosse M, Botti S, Bujie Z, Bystrom M, Capitanu B, Carvalho-Silva D, Chardon P, Chen C, Cheng R, Choi S-H, Chow W, Clark R.C, Clee C, Crooijmans R.P.M.A, Dawson H.D, Dehais P, De Sapio F, Dibbits B, Drou N, Du Z-Q, Eversole K, Fadista J, Fairley S, Faraut T, Faulkner G.J, Fowler K.E, Fredholm M, Fritz E, Gilbert J.G.R, Giuffra E, Gorodkin J, Griffin D.K, Harrow J.L, Hayward A, Howe K, Hu Z-L, Humphray S.J, Hunt T, Hornshøj H, Jeon J-T, Jern P, Jones M, Jurka J, Kanamori H, Kapetanovic R, Kim J, Kim J-H, Kim K-W, Kim T-H, Larson G, Lee K, Lee K-T, Leggett R, Lewin H.A, Li Y, Liu W, Loveland J.E, Lu Y, Lunney J.K, Ma J, Madsen O, Mann K, Matthews L, McLaren S, Morozumi T, Murtaugh M.P, Narayan J, Truong Nguyen D, Ni P, Oh S-J, Onteru S, Panitz F, Park E-W, Park H-S, Pascal G, Paudel Y, Perez-Enciso M, Ramirez-Gonzalez R, Reecy J.M, Rodriguez-Zas S, Rohrer G.A, Rund L, Sang Y, Schachtschneider K, Schraiber J.G, Schwartz J, Scobie L, Scott C, Searle S, Servin B, Southey B.R, Sperber G, Stadler P, Sweedler J.V, Tafer H, Thomsen B, Wali R, Wang J, Wang J, White S, Xu X, Yerle M, Zhang G, Zhang J, Zhang J, Zhao S, Rogers J, Churcher C, Schook L.B (2012) Analyses of pig genomes provide insight into porcine demography and evolution Nature 491(7424):393–398
  5. Kojima M, Ashino T, Yoshida T, Iwakura Y, Degawa M (2012) Involvement of interleukin-1 in lead nitrate-induced hypercholesterolemia in mice Biological & Pharmaceutical Bulletin 35(2):246-250
  6. Matsumoto T, Nakajima I, Eguchi-Ogawa T, Nagamura Y, Hamasima N, Uenishi H (2012) Changes in gene expression in a porcine preadipocyte cell line during differentiation Animal Genetics43(5):535-544
  7. Matsumoto T, Okumura N, Uenishi H, Hayashi T, Hamasima N, Awata T (2012) Population structure of pigs determined by single nucleotide polymorphisms observed in assembled expressed sequence tags Animal Science Journal 83(1):14-22
  8. Matsumoto T, Okumura N, Uenishi H, Hayashi T, Hamasima N, Awata T (2012) Porcine single nucleotide polymorphism (SNP) development and population structure of pigs assessed by validated SNPs Biochemical Genetics 50(5-6):428-439
  9. Muneta Y, Minagawa Y, Kusumoto M, Shinkai H, Uenishi H, Splichal I (2012) Development of allele-specific primer PCR for a swine TLR2 SNP and comparison of the frequency among several pig breeds of Japan and the Czech Republic Journal of Veterinary Medical Science 74(5):553-559
  10. Muneta Y, Minagawa Y, Kusumoto M, Shinkai H, Uenishi H, Splichal I (2012) Allele-specific primer polymerase chain reaction for a single nucleotide polymorphism (C1205T) of swine Toll-like receptor 5 and comparison of the allelic frequency among several pig breeds in Japan and the Czech Republic Microbiology and Immunology 56(6):385-391
  11. Okamura T, Onodera W, Tayama T, Kadowaki H, Kojima-Shibata C, Suzuki E, Uemoto Y, Mikawa S, Hayashi T, Awata T, Fujishima-Kanaya N, Mikawa A, Uenishi H, Suzuki K (2012) A genome-wide scan for quantitative trait loci affecting respiratory disease and immune capacity in Landrace pigs Animal Genetics 43(6):721-729
  12. Sato M, Akasaka E, Saitoh I, Ohtsuka M, Nakamura S, Sakurai T, Watanabe S (2012) A simplified protocol for the semi-large scale recovery of plasmids from Escherichia coli grown on agar plates Journal of Biomedical Science and Engineering 5(7):406-408
  13. Sato M, Akasaka E, Saitoh I, Ohtsuka M, Watanabe S (2012) In vivo gene transfer in mouse preimplantation embryos after intraoviductal injection of plasmid DNA and subsequent in vivo electroporation Systems Biology in Reproductive Medicine 58(5):278-287
  14. Sato M, Akasaka E, Saitoh I, Ohtsuka M, Watanabe S (2012) Development of a technique for efficient gene transfer to antral follicular cells in the mouse ovary Systems Biology in Reproductive Medicine 58(3):136-141
  15. Sato M, Ohtsuka M, Miura H, Miyoshi K, Watanabe S (2012) Determination of the optimal concentration of several selective drugs useful for generating multi-transgenic porcine embryonic fibroblasts Reproduction in Domestic Animals 47(5):759-765
  16. Sato M, Ohtsuka M, Nakamura S, Sakurai T, Watanabe S, Yasuoka Y (2012) Functional recovery of a whole ovary transplanted into syngenic testis in mice Cloning & Transgenesis 1:1
  17. Suto J (2012) Quantitative trait locus mapping of genes associated with vacuolation in the adrenal X-zone of the DDD/Sgn inbred mouse BMC Genetics 13:95
  18. Suto J (2012) Quantitative trait locus mapping of genes that control body length and plasma insulin-like growth factor 1 level in mice BMC Research Notes 5:547
  19. Suto J (2012) Development of an efficient method for genotyping at the gd locus in NC/Sgn mice based on PCR-RFLP analysis Journal of Veterinary Medical Science 74(8):1003-1006
  20. Suto J (2012) Quantitative trait loci that control plasma lipid levels in an F2 intercross between C57BL/6J and DDD.Cg-Ay inbred mouse strains Journal of Veterinary Medical Science 74(4):449-456
  21. Suzuki A, Okumura N, Uehara Y, Uenishi H, Awata T (2012) An identification method for the Tokyo X strain; The pig brand of the Tokyo Metropolitan Agriculture and Forestry Research Center Journal of Animal and Veterinary Advances 11(22):4236-4245
  22. Suzuki K, Kobayashi E, Yamashita H, Uenishi H, Churkina I, Plastow G, Hamasima N, Mitsuhashi T (2012) Structural analysis of MHC alleles in an RSV tumour regression chicken using a BAC library Animal Genetics 43(3):348-351
  23. Suzuki S, Iwamoto M, Saito Y, Fuchimoto D, Sembon S, Suzuki M, Mikawa S, Hashimoto M, Aoki Y, Najima Y, Takagi S, Suzuki N, Suzuki E, Kubo M, Mimuro J, Kashiwakura Y, Madoiwa S, Sakata Y, Perry A.C.F, Ishikawa F, Onishi A (2012) Il2rg gene-targeted severe combined immunodeficiency pigs Cell Stem Cell 10(6):753-758
  24. Uenishi H, Morozumi T, Toki D, Eguchi-Ogawa T, Rund L.A, Schook L.B (2012) Large-scale sequencing based on full-length-enriched cDNA libraries in pigs: contribution to annotation of the pig genome draft sequence BMC Genomics 13:581