農業生物先端ゲノム研究センター

イネゲノム育種研究ユニット


2012年-2015年  2010-2011年

  1. Fukuda A, Sugimoto K, Ando T, Yamamoto T, Yano M (2015) Chromosomal locations of a gene underlying heat-accelerated brown spot formation and its suppressor genes in rice Molecular Genetics and Genomics 290(3):1085-1094 DOI: 10.1007/s00438-014-0975-5
  2. Fukuoka S, Saka N, Mizukami Y, Koga H, Yamanouchi U, Yoshioka Y, Hayashi N, Ebana K, Mizobuchi R, Yano M (2015) Gene pyramiding enhances durable blast disease resistance in rice Scientific Reports 5:7773
  3. Matsubara K, Yamamoto E, Mizobuchi R, Yonemaru J, Yamamoto T, Kato H, Yano M (2015) Hybrid breakdown caused by epistasis-based recessive incompatibility in a cross of rice (Oryza sativa L.) Journal of Heredity 106(1):113-122
  4. Arai-Sanoh Y, Takai T, Yoshinaga S, Nakano H, Kojima M, Sakakibara H, Kondo M, Uga Y (2014) Deep rooting conferred by DEEPER ROOTING 1 enhances rice yield in paddy fields Scientific Reports 4:5563
  5. Matsuda F, Nakabayashi R, Yang Z, Okazaki Y, Yonemaru J, Ebana K, Yano M, Saito K (2014) Metabolome-genome-wide association study (mGWAS) dissects genetic architecture for generating natural variation in rice secondary metabolism The Plant Journal DOI: 10.1111/tpj.12681
  6. Mizobuchi R, Sato H, Fukuoka S, Tsushima S, Yano M (2015) Fine mapping of RBG2, a quantitative trait locus for resistance to Burkholderia glumae, on rice chromosome 1 Molecular Breeding 35(1):15
  7. Takai T, Ikka T, Kondo K, Nonoue Y, Ono N, Arai-Sanoh Y, Yoshinaga S, Nakano H, Yano M, Kondo M, Yamamoto T (2014) Genetic mechanisms underlying yield potential in the rice high-yielding cultivar Takanari, based on reciprocal chromosome segment substitution lines BMC Plant Biology 14:2955
  8. Yamamoto E, Iwata H, Tanabata T, Mizobuchi R, Yonemaru J, Yamamoto T, Yano M (2014) Effect of advanced intercrossing on genome structure and on the power to detect linked quantitative trait loci in a multi-parent population: a simulation study in rice BMC Genetics 15:50
  9. Yonemaru J, Mizobuchi R, Kato H, Yamamoto T, Yamamoto E, Matasubara K, Hirabayashi H, Takeuchi Y, Tsunematsu H, Ishii T, Ohta H, Maeda H, Ebana K, Yano M (2014) Genomic regions involved in yield potential detected by genome-wide association analysis in Japanese high-yielding rice cultivars BMC Genomics 15:346
  10. Takai T, Adachi S, Taguchi-Shiobara F, Sanoh-Arai Y, Iwasawa N, Yoshinaga S, Hirose S, Taniguchi Y, Yamanouchi U, Wu J, Matsumoto T, Sugimoto K, Kondo K, Ikka T, Ando T, Kono K, Ito S, Shomura A, Ookawa T, Hirasawa T, Yano M, Kondo M, Yamamoto T (2013) A natural variant of NAL1, selected in high-yield rice breeding programs, pleiotropically increases photosynthesis rate Scientific Reports 3:2149 10.1038/srep02149
  11. Hori K, Ogiso-Tanaka E, Matsubara K, Yamanouchi U, Ebana K, Yano M (2013) Hd16, a gene for casein kinase I, is involved in the control of rice flowering time by modulating the day-length response The Plant Journal (Published Online):Accepted Article 10.1111/tpj.12268
  12. Mizobuchi R, Sato H, Fukuoka S, Tanabata T, Tsushima S, Imbe T, Yano M (2013) Mapping a quantitative trait locus for resistance to bacterial grain rot in rice Rice 6:13
  13. Uga Y, Sugimoto K, Ogawa S, Rane J, Ishitani M, Hara N, Kitomi Y, Inukai Y, Ono K, Kanno N, Inoue H, Wu J, Matsumoto T, Takai T, Okuno K, Yano M (2013) Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions Nature Genetics doi:10.1038/ng.2725
  14. Fukuoka S, Mizobuchi R, Saka N, Ivan S, Matsumoto T, Okuno K, Yano M (2012) A multiple gene complex on rice chromosome 4 is involved in durable resistance to rice blast Theoretical and Applied Genetics125(3):551-559
  15. Hori K, Kataoka T, Miura K, Yamaguchi M, Saka N, Nakahara T, Sunohara Y, Ebana K, Yano M (2012) Variation in heading date conceals quantitative trait loci for other traits of importance in breeding selection of rice Breeding Science 62(3):223-234
  16. Matsubara K, Ogiso-Tanaka E, Hori K, Ebana K, Ando T, Yano M (2012) Natural variation in Hd17, a homolog of Arabidopsis ELF3 that is involved in rice photoperiodic flowering Plant and Cell Physiology 53(4):709-716 doi:10.1093/pcp/pcs028
  17. Tanabata T, Shibaya T, Hori K, Ebana K, Yano M (2012) SmartGrain: High-throughput phenotyping software for measuring seed shape through image analysis Plant Physiology 160(4):1871-1880
  18. Uga Y, Hanzawa E, Nagai S, Sasaki K, Yano M, Sato T (2012) Identification of qSOR1, a major rice QTL involved in soil-surface rooting in paddy fields Theoretical and Applied Genetics 124(1):75-86 doi;10.1007/s00122-011-1688-3
  19. Yamamoto E, Yonemaru J, Yamamoto T, Yano M (2012) OGRO: The Overview of functionally characterized Genes in Rice online database Rice 5:26
  20. Yonemaru J, Morita S (2012) Image analysis of grain shape to evaluate the effects of high temperatures on grain filling of rice, Oryza sativa L. Field Crops Research 137:268-271
  21. Yonemaru J, Yamamoto T, Ebana K, Yamamoto E, Nagasaki H, Shibaya T, Yano M (2012) Genome-wide haplotype changes produced by artificial selection during modern rice breeding in Japan PLoS ONE 7(3):e32982 doi:10.1371/journal.pone.0032982
  22. Ebana K, Shibaya T, Wu J, Matsubara K, Kanamori H, Yamane H, Yamanouchi U, Mizubayashi T, Kono I, Shomura A, Ito S, Ando T, Hori K, Matsumoto T, Yano M (2011) Uncovering of major genetic factors generating naturally occurring variation in heading date among Asian rice cultivars Theoretical and Applied Genetics 122:1199-1210 doi:10.1007/s00122-010-1524-1
  23. Marzougui S, Sugimoto K, Yamanouchi U, Shimono M, Hoshino T, Hori K, Kobayashi M, Ishiyama K, Yano M (2012) Mapping and characterization of seed dormancy QTLs using chromosome segment substitution lines in rice Theoretical and Applied Genetics 124(5):893-902 doi:10.1007/s00122-011-1753-y

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